Parameter | Position at Codon | |||
First | Second | Third | Total | |
Thyrosine frequency | 29.9% | 42.2% | 26.7% | 306 |
Cytosine frequency | 17.6% | 21.6% | 28.1% | 306 |
Adenine frequency | 25.8% | 17.6% | 42.7% | 306 |
Guanine frequency | 26.7% | 18.6% | 2.5% | 306 |
Frequency of invariable sites | 73% | |||
Frequency of parsimony informative sites | 27% | |||
Nucleotide diversity (Pi) | 0.069833 | |||
Number of haplotipes | 9 | |||
Total number of mutations | 97 | |||
Polymorphic sites | 83 | |||
ts/tv ratio (k) | Purine = 5.253, Pyrimidine = 13.418 | |||
ts/tv ratio (R) | 4.978 | |||
Gamma discrete distribution (Tamura-Nei Model) | 0.1882 | |||
Mean of evolutionary rate | 0.00, 0.01, 0.10, 0.63, dan 4.26 substitution per site |